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Multiple sequence alignment
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#	Item
211	file:///Users/jmonson/Documents/Eudora%20Folder/Attachments%20Folder/23492_2_fig_1_jhw7ey.html Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2008-02-18 09:03:17 Computational science Multiple sequence alignment Sequence alignment T-Coffee ProbCons MUSCLE BLAST Homology modeling Substitution matrix Computational phylogenetics Bioinformatics Science
212	W604–W608 Nucleic Acids Research, 2006, Vol. 34, Web Server issue doi:[removed]nar/gkl092 Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2008-02-15 09:34:09 Computational science T-Coffee Sequence alignment Multiple sequence alignment Threading STING BLAST Sequence analysis Structural genomics Bioinformatics Science Computational phylogenetics
213	doi:[removed]j.jmb[removed]J. Mol. Biol[removed], 385–395 3DCoffee: Combining Protein Sequences and Structures within Multiple Sequence Alignments Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-10-25 20:57:43 Sequence alignment Multiple sequence alignment Structural alignment T-Coffee Threading Sequence analysis Homology modeling Substitution matrix Structural genomics Bioinformatics Science Biology
214	doi:[removed]jmbi[removed]available online at http://www.idealibrary.com on J. Mol. Biol[removed], 205±217 T-Coffee: A Novel Method for Fast and Accurate Multiple Sequence Alignment Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-10-25 21:03:20 Computational science Sequence alignment Multiple sequence alignment T-Coffee Smith–Waterman algorithm FASTA Homology modeling BLOSUM Clustal Bioinformatics Computational phylogenetics Science
215	8VLQJHQHWLF$OJRULWKPVIRU3DLUZLVHDQG0XOWLSOH 6HTXHQFH$OLJQPHQWV Cédric Notredame Information Génétique et Structurale CNRS-UMR 1889 Add to Reading List Source URL: www.tcoffee.org Language: English* - Date: 2009-10-25 20:59:01 Applied mathematics Sequence alignment Multiple sequence alignment Genetic algorithm Phylo Stochastic optimization BLAST Substitution matrix Smith–Waterman algorithm Computational phylogenetics Bioinformatics Science
216	R EVIEW Recent progresses in multiple sequence alignment: a survey Cédric Notredame Information Génétique et Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-10-25 20:59:27 Biotechnology Multiple sequence alignment Sequence alignment T-Coffee Sequence analysis BLAST Structural alignment Clustal Phylo Bioinformatics Computational phylogenetics Science
217	BIOINFORMATICS APPLICATIONS NOTE Vol. 22 no[removed], pages 2439–2440 doi:[removed]bioinformatics/btl404 Sequence analysis Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2006-11-17 11:53:12 Biology Sequence alignment T-Coffee Multiple sequence alignment Structural alignment Sequence analysis MUSCLE Protein structure prediction Bioinformatics Computational phylogenetics Science
218	Published online 17 April[removed]Nucleic Acids Research, 2008, Vol. 36, No. 9 e52 doi:[removed]nar/gkn174 R-Coffee: a method for multiple alignment Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-07-17 07:18:54 Biology Sequence alignment T-Coffee Multiple sequence alignment Structural alignment Sequence analysis Nucleic acid structure prediction Nucleic acid sequence Substitution matrix Bioinformatics Science Computational phylogenetics
219	Vol. 17 no[removed]Pages 1–3 BIOINFORMATICS Mocca: semi-automatic method for domain Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-10-25 20:59:09 Biology BLAST Multiple sequence alignment Sequence alignment T-Coffee Sequence analysis DNA Protein domain Smith–Waterman algorithm Computational phylogenetics Science Bioinformatics
220	doi:[removed]j.jmb[removed]J. Mol. Biol[removed], 385–395 3DCoffee: Combining Protein Sequences and Structures within Multiple Sequence Alignments Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2004-09-07 11:45:28 Sequence alignment Multiple sequence alignment Structural alignment T-Coffee Threading Sequence analysis Homology modeling Substitution matrix Structural genomics Bioinformatics Science Biology

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